Can't APFS defragmentation help with this?
Apple quietly added a defragmentation feature to APFS in macOS Mojave. APFS defragmentation is disabled by default, and only lightly documented in the diskutil man page. Apple gives no indication of what this defragmentation feature actually does, in particular whether it defragments filesystem structures. Based on the results of the tests above, however, I would conclude that APFS defragmentation does not cause filesystem metadata to be physically clumped together on the disk."
Now that I have the OS on a HFS+ drive I don't know if it would defrag any files that have been fragmented by the APFS architecture. Time for more googling.
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